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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015817466.1_cds_XP_016499194.1_13142
CDS Infomation

[gene=LOC107817825] [db_xref=GeneID:107817825] [protein=ceramide kinase-like isoform X2] [protein_id=XP_016499194.1] [location=join(54258..54434,55721..55882,55968..56135,56245..56337,58003..58095,59141..59345,59442..59468,59608..59692,59957..60106,60931..61032,61237..61614,62126..62192,62282..62419)] [gbkey=CDS]
Sequence

ATGGAGAGAAACCCAAATGAAAATGATTTTCTTGAAAATAATTCACCAGAAAATGTACCG
TTTAATTCTCAAGACTCAATTTTTAGCTCAAATCTATTCTTGGATGGTGATGGAGAAGTT
ATTTTAACTCAAACTTCTGATAAATTGCATTGGAAATCTGTTGAATCTGTACTTAATGGT
CAGGATCCATCATCTTGTTTCGGCATAGAACTTGTTTCTAAGAGTGAAACCACATTGTGT
TTTAGTGATATATACTCCGCAGAGTTCATAAATTGCGGTTTGGTACACGAAGCTTCGTTC
CTAAATGCTAGAGGACCTCTCTTGGGCCAATCATTTGAGATGTACCGATTTACAATTCGC
GGAGTCCAGAAATCAAAGTCGCAGCCTTCTGTTTTGGTTCCATCCCTTTACACCTTTGGC
CATAAGGATTCACAAACATGTCAGATGTGGGTTAATCGGATTAATGATCATCTAAACATG
GATGCGGAAAGGCCCAAGAACCTTATGGTTTTTGTTCACCCAAAGAGTGGGAAAGGACTC
GGATATAAAGTTTGGGAAACGGTGGCTCCGACATTTTCTCAAGCGAAAGTGAAAACGAAG
GTGACTGTGACAGAAAGGGCAGGACAAGCTTTGGATATAATGTCCTCCATTACAAATAAA
GAGCTCAGTGCATATGATGGCGTAGTAGCAGTTGGCGGTGATGGATTTTTCAATGAAATA
CTGAACGGTCTTCTCTTGTCGAGGCACAAATCTTCATATCCACCACGCCCTACTGAACTT
AACCATCCCGTTGAGGAAAATGGCAACAGGCCTGTTCTTGATGCCAATGGGGATATCAGG
GACCCATCCGATAGCTGTGAAGATGAATCCCCTCTTCTAAAGCAATCAGCAAACCTCAGA
ACCGGAGAAGATTCCTGCCAAACAGCAGAAGATCTTGAGTTTTCTTTCCCAAATGAAAAA
TTCAGATTTGGAATTATTCCAGCAGGATCAACAGATGCCATTGTAATTTGTACTACAGGG
GCGAGGGATGCTATAACTTCTGCATTGCAGATTGTCCTTGGTAAAGCGGTGTGCCTTGAT
GTAGCTCAAGTTGTAAGATGGAAAAAAACTTGTACATCTAAAGATGAACCCTGTGTACGT
TATGCAGCTTCTTTCGCTGGGTATGGGTTTTATGGAGATGTAATCACTGAGAGCGAGAAG
TACAGGTGGATGGGTCCTAAGCGGTATGATTATGCGGGAACAAAGGTGTTTCTTCGTCAC
AGATCGTATGAAGCAGAAGTTGCATACGTGGAAGTTGAATCGGAAAAGAAAAACATAGGT
CTTGAGAAAGGGTCGTCGGGCAGCTGGACGAAGGGATTGTGGCCCCTACTCAAAAAGTCT
GAAAGAGTAGCTTGTCGTGCAAACTGTGGTATTTGCAAAACAAAAGCAGACCACACGTCG
GCTAAATGTCCGAGCTTGGAGCCCTATTCGAAAGATTCAAGATGGTTAAAGTCCAGAGGG
CGTTTTCTTAGTGTTGGAGCGGCAGTAATCTCTTGCAGAAATGAAAAAGCGCCCGATGGT
CTGGTGGCTGATGCACACCTTTCAGATGGTTTTCTACATCTTATATTAATTAAGGACTGC
CCTCATGCATTTTATTTGTGTCACCTTCTCCAGCTAGCAAAGAAGGATGGGAACCCGCTA
GATTATGAATTCGTGGAGCATCACAAAACTCCGGCATTTACATTCACTTCTTTCGGCAAG
GAGAGCATATGGAACGTTGATGGCGAGCTCTTTCAAGCTCATCAACTTTCAGCTCAAGTA
TTTCGTGGACTTATTAACTTATTTGCTGCTGGTCCCGAAGCCTAA

Peptide Sequence

PEP ID

XP_016499194.1
PEP Infomation

PREDICTED: ceramide kinase-like isoform X2 [Nicotiana tabacum]
Sequence

MERNPNENDFLENNSPENVPFNSQDSIFSSNLFLDGDGEVILTQTSDKLHWKSVESVLNG
QDPSSCFGIELVSKSETTLCFSDIYSAEFINCGLVHEASFLNARGPLLGQSFEMYRFTIR
GVQKSKSQPSVLVPSLYTFGHKDSQTCQMWVNRINDHLNMDAERPKNLMVFVHPKSGKGL
GYKVWETVAPTFSQAKVKTKVTVTERAGQALDIMSSITNKELSAYDGVVAVGGDGFFNEI
LNGLLLSRHKSSYPPRPTELNHPVEENGNRPVLDANGDIRDPSDSCEDESPLLKQSANLR
TGEDSCQTAEDLEFSFPNEKFRFGIIPAGSTDAIVICTTGARDAITSALQIVLGKAVCLD
VAQVVRWKKTCTSKDEPCVRYAASFAGYGFYGDVITESEKYRWMGPKRYDYAGTKVFLRH
RSYEAEVAYVEVESEKKNIGLEKGSSGSWTKGLWPLLKKSERVACRANCGICKTKADHTS
AKCPSLEPYSKDSRWLKSRGRFLSVGAAVISCRNEKAPDGLVADAHLSDGFLHLILIKDC
PHAFYLCHLLQLAKKDGNPLDYEFVEHHKTPAFTFTSFGKESIWNVDGELFQAHQLSAQV
FRGLINLFAAGPEA

Transcript Sequence

Gene sequence data has not been registered.